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Volume 10 Supplement 1

Selected papers from the Seventh Asia-Pacific Bioinformatics Conference (APBC 2009)

Research

Edited by Michael Q Zhang, Michael S Waterman and Xuegong Zhang

The Seventh Asia Pacific Bioinformatics Conference (APBC 2009). Go to conference site.

Beijing, China13-16 January 2009

Page 2 of 2

  1. Spectra resulting from Surface-Enhanced Laser Desorption/Ionisation (SELDI) mass spectrometry measurements are constructed by combining sub-spectra, each of which are the result of a single firing of the laser...

    Authors: Wouter Meuleman, Judith YMN Engwegen, Marie-Christine W Gast, Lodewyk FA Wessels and Marcel JT Reinders

    Citation: BMC Bioinformatics 2009 10(Suppl 1):S51

    Content type: Research

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  2. Although microarray gene expression analysis has become popular, it remains difficult to interpret the biological changes caused by stimuli or variation of conditions. Clustering of genes and associating each ...

    Authors: Taiji Suzuki, Masashi Sugiyama, Takafumi Kanamori and Jun Sese

    Citation: BMC Bioinformatics 2009 10(Suppl 1):S52

    Content type: Research

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  3. The Janus kinase-signal transducer and activator of transcription (JAK/STAT) pathway is one of the most important targets for myeloproliferative disorder (MPD). Although several efforts toward modeling the pat...

    Authors: Hong-Hee Won, Inho Park, Eunjung Lee, Jong-Won Kim and Doheon Lee

    Citation: BMC Bioinformatics 2009 10(Suppl 1):S53

    Content type: Research

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  4. Genes show different sensitivities in expression corresponding to various biological conditions. Systematical study of this concept is required because of its important implications in microarray analysis etc....

    Authors: Pei Hao, Siyuan Zheng, Jie Ping, Kang Tu, Christian Gieger, Rui Wang-Sattler, Yang Zhong and Yixue Li

    Citation: BMC Bioinformatics 2009 10(Suppl 1):S56

    Content type: Research

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  5. Genome-scale models of metabolism have only been analyzed with the constraint-based modelling philosophy. Some gene deletion studies on in silico organism models at genome-scale have been made, but most of them w...

    Authors: Zixiang Xu, Xiao Sun and Shihai Yu

    Citation: BMC Bioinformatics 2009 10(Suppl 1):S62

    Content type: Research

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  6. Classification using aCGH data is an important and insufficiently investigated problem in bioinformatics. In this paper we propose a new classification method of DNA copy number data based on the concept of li...

    Authors: Tomasz Gambin and Krzysztof Walczak

    Citation: BMC Bioinformatics 2009 10(Suppl 1):S64

    Content type: Research

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  7. Several features are known to correlate with the GC-content in the human genome, including recombination rate, gene density and distance to telomere. However, by testing for pairwise correlation only, it is im...

    Authors: Jan Freudenberg, Mingyi Wang, Yaning Yang and Wentian Li

    Citation: BMC Bioinformatics 2009 10(Suppl 1):S66

    Content type: Research

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  8. Genome-wide association studies prove to be a powerful approach to identify the genetic basis of different human diseases. We studied the relationship between seven diseases characterized in a previous genome-...

    Authors: Wenhui Huang, Pengyuan Wang, Zhen Liu and Liqing Zhang

    Citation: BMC Bioinformatics 2009 10(Suppl 1):S68

    Content type: Research

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  9. Automated candidate gene prediction systems allow geneticists to hone in on disease genes more rapidly by identifying the most probable candidate genes linked to the disease phenotypes under investigation. Her...

    Authors: Erdahl T Teber, Jason Y Liu, Sara Ballouz, Diane Fatkin and Merridee A Wouters

    Citation: BMC Bioinformatics 2009 10(Suppl 1):S69

    Content type: Research

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  10. Gene copy number and gene expression values play important roles in cancer initiation and progression. Both can be measured with high-throughput microarrays and some methodologies to integrate and analyze thes...

    Authors: Reija Autio, Matti Saarela, Anna-Kaarina Järvinen, Sampsa Hautaniemi and Jaakko Astola

    Citation: BMC Bioinformatics 2009 10(Suppl 1):S70

    Content type: Research

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  11. We address the problem of studying recombinational variations in (human) populations. In this paper, our focus is on one computational aspect of the general task: Given two networks G1 and G2, with both mutation ...

    Authors: Laxmi Parida, Asif Javed, Marta Melé, Francesc Calafell and Jaume Bertranpetit

    Citation: BMC Bioinformatics 2009 10(Suppl 1):S72

    Content type: Research

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  12. Identifying the genetic components of common diseases has long been an important area of research. Recently, genotyping technology has reached the level where it is cost effective to genotype single nucleotide...

    Authors: Søren Besenbacher, Christian NS Pedersen and Thomas Mailund

    Citation: BMC Bioinformatics 2009 10(Suppl 1):S74

    Content type: Research

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  13. In addition to single-locus (main) effects of disease variants, there is a growing consensus that gene-gene and gene-environment interactions may play important roles in disease etiology. However, for the very...

    Authors: Quan Long, Qingrun Zhang and Jurg Ott

    Citation: BMC Bioinformatics 2009 10(Suppl 1):S75

    Content type: Research

    Published on:

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    3.242 - 2-year Impact Factor
    3.213 - 5-year Impact Factor
    1.156 - Source Normalized Impact per Paper (SNIP)
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