From: Image-centric compression of protein structures improves space savings
PDB/ | BCIF | MMTF | MMTF | PIC (lossy precision) | Foldcomp | ||||
---|---|---|---|---|---|---|---|---|---|
Protein | CIF size | Size | Size | C\(\alpha\)-lossy | Coord | MMTF- | Total | RMSD | (Lossy precision) |
(KB) | (KB) | (KB) | (KB) | (KB) | Meta (KB) | (KB) | (Å) | (KB) | |
2ja9 | 163 | 24 | 13 | 3 | 9 | 4 | 14 | 0.030680 | segfault |
2jan | 1101 | 108 | 98 | 15 | 61 | 22 | 84 | 0.047302 | 26 |
2jbp | 2397 | 224 | 214 | 30 | 108 | 52 | 161 | 0.043140 | runtime>day |
2ja8 | 2831 | 299 | 249 | 42 | 138 | 59 | 197 | 0.043373 | runtime>day |
2ign | 3579 | 329 | 321 | 41 | 147 | 71 | 219 | 0.068555 | runtime>day |
2jd8 | 4457 | 382 | 384 | 49 | 196 | 88 | 285 | 0.056100 | runtime>day |
2ja7 | 5605 | 534 | 488 | 74 | 258 | 110 | 369 | 0.055422 | runtime>day |
2fug | 6386 | 580 | 566 | 82 | 283 | 128 | 412 | 0.060134 | runtime>day |
2b9v | 6817 | 594 | 608 | 73 | 288 | 128 | 417 | 0.072982 | runtime>day |
2j28 | 8152 | 738 | 586 | 70 | 346 | 50 | 396 | 0.055343 | runtime>day |
6hif | 12726 | 877 | 894 | 167 | 372 | 194 | 566 | 0.061988 | runtime>day |
3j7q | 16027 | 1211 | 1027 | 108 | 475 | 234 | 710 | 0.058150 | runtime>day |
3j9m | 17995 | 1339 | 1198 | 160 | 525 | 282 | 807 | 0.069300 | runtime>day |
6gaw | 20825 | 1584 | 1359 | 184 | 587 | 324 | 911 | 0.070872 | runtime>day |
5t2a | 22787 | 1628 | 1396 | 151 | 651 | 262 | 914 | 0.068460 | segfault |
4ug0 | 24906 | 1827 | 1606 | 177 | 707 | 364 | 1072 | 0.069050 | runtime>day |
4v60 | 24377 | 1509 | 1618 | 242 | 730 | 191 | 922 | 0.119788 | 491 |
4wro | 35661 | 2336 | 1902 | 171 | 848 | 447 | 1296 | 0.085947 | runtime>day |
6fxc | 31328 | 1961 | 1678 | 181 | 917 | 103 | 1020 | 0.099960 | segfault |
4wq1 | 40130 | 2646 | 2212 | 216 | 968 | 523 | 1492 | 0.086623 | runtime>day |