Table 1 Datasets used for optimizing large-scale genomic sequencing reads compression
Dataset name (species) | Sequencing platform (method) | Number of reads (millions) | Total size (GB) | Reads size (GB) | Length (bp) | Number of files |
|---|---|---|---|---|---|---|
Homo sapiens | NextSeq-550 (SE) | 507.40 | 111.25 | 36.78 | 75 | 24 |
Cicer arietinum | HiSeq-2000 (PE) | 2060.96 | 680.60 | 178.54 | 90 | 60 |
Salvelinus fontinalis | Ion-Torrent (SE) | 757.46 | 189.66 | 58.14 | 80 | 360 |
Total | – | 3325.82 | 981.52 | 273.46 | – | 444 |