Fig. 4

CNV analysis and CancerSEA functional states (PJ016). a CNV heatmap where cells (columns) are grouped into “CNV clusters”. b UMAP visualizations where cells are colored by CNV clusters. c Overlap indices between expression clusters (prefix “EXPR_”) and CNV clusters (prefix “CNV_”). d Heatmap of CancerSEA functional state expression score (z-score) in CNV clusters