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Table 1 Values of RD and K parameters for models that had the top position on the ranking list (the GDT_TS values)

From: Role of environmental specificity in CASP results

TARGET

BEST MODEL

Correlation coefficient

ID

RD

K

K

RD

GDT_TS

 

T0990-D3

0.528

0.5

0.6

0.575

48.71

 − 0.275

T1024

0.648

0.8

0.4

0.540

63.30

 − 0.466

T0953s-D3

0.286

0.1

0.3

0.468

43.01

 − 0.785

  1. The determination of RD and K values for the target – the T and O distributions obtained for the structures as given in PDB. The correlation coefficient expresses the relationship of the rating (per GDT_TS) of the model to the RD parameter value, which determines the degree of adaptation of the protein structure to environmental conditions
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BMC Bioinformatics

ISSN: 1471-2105

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