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Table 5 The values of RD and K parameters describing the status of domains distinguished in a single Hsp40 chain

From: Ab initio protein structure prediction: the necessary presence of external force field as it is delivered by Hsp40 chaperone

Domain

Fragment

RD

K

Number of residues eliminated

1. (Blue)

1–107

0.514

0.4

4

2. (Blue)

1–115

0.499

0.4

 

3. (Blue)

(1–115) + (163–170)

0.519

0.4

7

4. (Red)

(116–162) + (171–182)

0.353

0.1

 

5. (Violet)

(183–257)

0.595

0.7

15

6. (Cyan)

(262–280)

0.592

0.4

3

7. Violet + Helix

(183–280)

0.563

0.5

13

  1. Column on right—number of residues eliminated to reach RD < 0.5
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BMC Bioinformatics

ISSN: 1471-2105

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