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Table 1 Proteins with structural units analyzed in the work and identifiers introduced for the purpose of this work

From: Ab initio protein structure prediction: the necessary presence of external force field as it is delivered by Hsp40 chaperone

PDB—ID

SKŁAD

NAME

ID in this paper

6PSI [11]

Chain A—chaperone

Hsp40-A

HspA-Comp (complex)

Chain C—chaperone

Hsp40-C

Chain B—client

PhoA

6PSI

Chain A—chaperone

Hsp40-A

HspA-AC

Chain C—chaperone

Hsp40-C

6PSI

Chain A—chaperone

Hsp40-A

Hsp40-A

6PSI

Chain C—chaperone

Hsp40-C

Hsp40-C

6PSI

Chain B—client

PhoA

PhoA-U (unfolded)

1EW8 [12]

Chain A

PhoA-A

PhoA-WT-AB

Chain B

PhoA-B

1EW8

Chain A

PhoA

PhoA-WT-A

  1. The right column gives the identification system for structural units as described in this paper
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BMC Bioinformatics

ISSN: 1471-2105

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