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Table 5 Significance speed up of RUBic on five real datasets measured in terms of execution time (s)

From: RUBic: rapid unsupervised biclustering

Dataset

Genes

Conditions

ARBic

QUBIC2

RUBic

Cls

ET

Cls

ET

Cls

ET

E. coli colombos

2093

2470

267

3215.451

2869

319.55

598

210.41

E. coli DREAM5

2442

805

137

2143.9128

2821

207.83

3163

145.337

Yeast GPL2529

3178

3025

415

12297.099

3555

1276.55

5668

752.15

Yeast DREAM5

3292

536

36

14524.4534

3311

1660.93

3163

740.66

Human SEEK GPL5175

4436

2308

296

13954.656

5044

1278.3

6215

1017.81

  1. Cls number of clusters, ET execution time (in s)
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BMC Bioinformatics

ISSN: 1471-2105

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