Fig. 4
From: Comparative Study of Single-stranded Oligonucleotides Secondary Structure Prediction Tools
Mfold prediction of a 6IY5, b 6FKE, c 1ECU, d 2L5K, and e 2VIC secondary structures with SantaLucia DNA and Mathews RNA models. Nucleotides wrongly predicted as unpaired with the SantaLucia model are colored in red, while they are colored in green when the corresponding base pairs are correctly predicted with the Mathews model. AptaMat distances from the experimental structures are reported