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Table 6 Extended \(\textrm{IDmap}\) corresponding to Table 2, with \(s_{ cp } = 2\)

From: Pan-genome de Bruijn graph using the bidirectional FM-index

\(id_{\textrm{B}}\)

0

1

2

3

4

5

6

7

8

9

\(id\)

5

6

2

3

4

0

4

1

4

1

\(offset\)

2

2

0

0

3

0

0

0

2

2

  1. First row: rank of the 1-bits in bit vector B; second row: node identifiers; third row: offset position of the k-mer with respect to the beginning of its node. Bold entries indicate checkpoint k-mers
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BMC Bioinformatics

ISSN: 1471-2105

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