Skip to main content

Table 2 Pairwise cophenetic correlation coefficients (CCC) and Robinson-Foulds distance (RF) among supermatrix (SM) trees in this study

From: EasyCGTree: a pipeline for prokaryotic phylogenomic analysis based on core gene sets

Method

EasyCGTree (UBCG)

UBCG

EasyCGTree (essential)

bcgTree

EasyCGTree (UBCG)

–

0.0556

0.0225

0.0962

UBCG

0.9923

–

0.0534

0.0468

EasyCGTree (essential)

0.9794

0.9577

–

0.0902

bcgTree

0.9929

0.9815

0.9915

–

  1. The CCC values are below diagonal, while the RF distance are above diagonal. The method details and corresponding trees could be found in Fig. 2: EasyCGTree (UBCG), Fig. 2A; UBCG, Fig. 2B; EasyCGTree (essential), Fig. 2C; and bcgTree, Fig. 2D
Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us