Fig. 4
From: cgMSI: pathogen detection within species from nanopore metagenomic sequencing data
Performance evaluation of pathogen identification using synthetic decoy mNGS datasets. A Identification results of cgMSI and ORI from 3200 simulated samples at different coverage ratios ranging from 0.1× to 5×, different background strains and two target-to-background ratios. Error bar indicates 95% CI. B The box plots show the pair ANI values of the actual target strain and the predicted strain corresponding to the samples in (A). The pair ANI value is used to further assess the accuracy of the prediction. A higher ANI value indicates a more accurate prediction. C Coverage estimated by cgMSI at four different coverage levels. Each dot represents a single sample. Colors represent different target strain coverage ratios in the samples