Skip to main content

Table 2 Benchmark datasets

From: Network-based prediction approach for cancer-specific driver missense mutations using a graph neural network

Benchmark

Data source

Positive

Negative

Protein unique

Kim et al.

In vivo

8

17

11

IARC TP53

In vitro

375

1533

1

Ng et al.

In vitro

116

357

43

Gene panel (OncoKB)

Literature-based

329

38,596

410

CGC-recurrent

Literature-based

33

6805

3261

  1. Number of positive and negative data and unique of proteins with mutations
Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us