From: KnotAli: informed energy minimization through the use of evolutionary information
family | Pre-shortened | Post-shortened | ||||||
---|---|---|---|---|---|---|---|---|
KnotAli | RNAalifold | Hxmatch | Cacofold | KnotAli | RNAalifold | Hxmatch | Cacofold | |
SRP-MAFFT | .415 | .129 | .134 | .206 | .582 | .315 | .300 | .419 |
Group I intron-MAFFT | .396 | .068 | .069 | .090 | .547 | .238 | .339 | .167 |
SRP-MUSCLE | .564 | .241 | .25 | .255 | .491 | .198 | .232 | .200 |
Group I intron-MUSCLE | .461 | .087 | .064 | .068 | .463 | .205 | .138 | .112 |