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Fig. 4 | BMC Bioinformatics

Fig. 4

From: LuxRep: a technical replicate-aware method for bisulfite sequencing data analysis

Fig. 4

Parameter estimates of \(\text{BS}_{\rm eff}\) and \(\text{seq}_{\rm err}\). The x-axis shows whether the samples were drawn from ‘G’ (good quality) or ‘B’ (bad/low quality) technical replicates corresponding to \(\text{BS}_{\rm eff}^B\) and \(\text{BS}_{\rm eff}^G\), respectively, and grouped according to the two scenarios, discussed in section "Estimating methylation levels", ‘GGB’ and ‘GBB’. Low and high coverage refer to \(N_{\rm{BS}} = 1 \dotsc 3\) and \(N_{\rm{BS}} = 10\), respectively

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