Table 1 Kinetic parameters of network elements
Element name | Symbol | Meaning |
|---|---|---|
Hetero-dimerization | \(\lambda\) | Association rate of the two different monomers |
\(\mu\) | Inverse half life of the dimer | |
Homo-dimerization | \(\lambda\) | Association rate of the two monomers |
\(\mu\) | Inverse half life of the dimer | |
Transformation of a substrate by an enzyme | \(\lambda\) | Association rate of the enzyme to the substrate |
\(\mu\) | Dissociation rate of the substrate from the enzyme | |
\(\nu\) | Transformation rate of substrate to product while bound to the enzyme | |
Gene | \(\lambda\) | On-rates of transcription factors |
\(\mu\) | Off-rates of transcription factors | |
\(\nu\) | Product synthesis rate | |
\(\delta\) | Product degradation rate | |
\(\beta_{1..N}\) | Delays in production |