From: MCKAT: a multi-dimensional copy number variant kernel association test
Chromosome | # CNVs | MCKAT | CKAT |
---|---|---|---|
chr1 | 4382 | \(1.257\times 10^{-1}\) | \(4.427\times 10^{-1}\) |
chr2 | 5584 | \(1.188\times 10^{-3}\)* | \(3.757\times 10^{-1}\) |
chr3 | 2925 | \(1.424\times 10^{-1}\) | \(4.502\times 10^{-1}\) |
chr4 | 3068 | \(4.606\times 10^{-1}\) | \(4.110\times 10^{-1}\) |
chr5 | 3237 | \(7.607\times 10^{-2}\) | \(4.505\times 10^{-1}\) |
chr6 | 2777 | \(5.054\times 10^{-1}\) | \(4.200\times 10^{-1}\) |
chr7 | 3549 | \(4.421\times 10^{-1}\) | \(4.657\times 10^{-1}\) |
chr8 | 5365 | \(4.308\times 10^{-7}\)* | \(4.064\times 10^{-1}\) |
chr9 | 2474 | \(5.666\times 10^{-2}\) | \(4.584\times 10^{-1}\) |
chr10 | 2378 | \(9.667\times 10^{-2}\) | \(4.436\times 10^{-1}\) |
chr11 | 3449 | \(1.107\times 10^{-3}\)* | \(3.655\times 10^{-1}\) |
chr12 | 3773 | \(3.638\times 10^{-1}\) | \(4.875\times 10^{-1}\) |
chr13 | 2462 | \(1.241\times 10^{-3}\)* | \(3.916\times 10^{-1}\) |
chr14 | 1219 | \(3.187\times 10^{-1}\) | \(4.613\times 10^{-1}\) |
chr15 | 1389 | \(3.952\times 10^{-1}\) | \(4.659\times 10^{-1}\) |
chr16 | 1565 | \(2.002\times 10^{-1}\) | \(4.960\times 10^{-1}\) |
chr17 | 1862 | \(2.416\times 10^{-1}\) | \(4.658\times 10^{-1}\) |
chr18 | 1120 | \(1.961\times 10^{-1}\) | \(4.717\times 10^{-1}\) |
chr19 | 1584 | \(1.967\times 10^{-1}\) | \(4.948\times 10^{-1}\) |
chr20 | 1835 | \(5.859\times 10^{-3}\) | \(4.237\times 10^{-1}\) |
chr21 | 648 | \(3.531\times 10^{-2}\) | \(3.939\times 10^{-1}\) |
chr22 | 780 | \(1.124\times 10^{-1}\) | \(4.327\times 10^{-1}\) |
chr X | 1421 | \(7.495\times 10^{-1}\) | \(4.917\times 10^{-1}\) |
chr Y | 250 | \(6.802\times 10^{-1}\) | \(4.755\times 10^{-1}\) |