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Table 5 Effect of embedding size

From: NeuRank: learning to rank with neural networks for drug–target interaction prediction

Data sets

k

NeuRank

pNeuRank

lNeuRank

DrugBank

8

0.8737

0.8785

0.8816

16

0.8911

0.8948

0.8972

32

0.8941

0.8983

0.9007

64

0.8858

0.8894

0.8920

128

0.8415

0.8463

0.8502

Enzymes

8

0.9469

0.9485

0.9502

16

0.9479

0.9496

0.9519

32

0.9483

0.9502

0.9539

64

0.9417

0.9434

0.9456

128

0.9036

0.9077

0.9118

  1. It shows the performance of AUC as the number of embedding size is changed
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BMC Bioinformatics

ISSN: 1471-2105

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