Fig. 2
From: LongStitch: high-quality genome assembly correction and scaffolding using long reads
Contiguity and correctness of assemblies improved with LongStitch compared to LRScaf and OPERA-LG. For three human individuals, NA12878, NA19240 and NA24385, short-read ABySS assemblies and long-read Shasta assemblies (white) were improved using long-read data from the respective individual. The resulting assemblies from LongStitch (orange), LRScaf (blue) and OPERA-LG (purple) were assessed using QUAST for their contiguity and correctness. Extensive misassemblies (as defined by QUAST) are shown on the x-axis. For the correction and scaffolding runs shown, the default steps of LongStitch were run (up to the ntLink stage). Ideal assemblies are located in the top-left corner