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Table 9 The predicted top 5 lncRNAs interacting with Q9UL18

From: LPI-deepGBDT: a multiple-layer deep framework based on gradient boosting decision trees for lncRNA–protein interaction identification

Dataset

lncRNAs

Confirmed

LPI-deepGBDT

LPI-BLS

LPI-CatBoost

PLIPCOM

LPL-SKF

LPI-HNM

Dataset 1

RPI001_1006774

YES

1

439

614

566

29

593

RP11-4O1

YES

2

169

177

204

558

10

LUCAT1

YES

3

110

315

48

930

48

RPI001_685651

YES

4

696

310

94

925

14

RPI001_25361

YES

5

411

819

83

234

94

Dataset 2

RP5-1085F17

YES

1

396

116

11

104

116

RPI001_79181

YES

2

521

276

302

78

15

RPI001_114047

YES

3

687

567

315

45

63

RPI001_81047

YES

4

789

330

125

88

17

RPI001_139850

YES

5

204

360

167

8

65

Dataset 3

RPI001_1036776

YES

1

5

469

3

810

107

RP11-357C3

YES

2

141

344

16

933

133

RPI001_878565

YES

3

148

561

50

221

74

HCG17

YES

4

22

118

4

707

129

AL139819

YES

5

251

533

34

131

111