Fig. 3

Baseline algorithm performances: Boxplots of ‘MAE A’ obtained for reference algorithms (‘MAE A’: Mean Absolute Error on estimated A, the matrix of cell proportion per patient). Each reference algorithm was run 5 times on each simulated data, for 10 independent simulations (50 measures were used to construct the boxplots). Each color represents the type of data used to infer A (‘DNAm’ for D_MET training set, ‘RNA’ for D_MET training set and ‘Both’ for methods integrating D_MET and D_RNA). Details of the algorithms can be found in the "Methods" section