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Table 17 The number of enriched pathways obtained by using the six genes datasets and the KEGG database

From: Using BioPAX-Parser (BiP) to enrich lists of genes or proteins with pathway data

Tool

CC

EC

TC

TCGA

GEO

  

TCGA

GEO

  

TCGA

GEO

  

NP

NP

U

I

NP

NP

U

I

NP

NP

U

I

BiP

274

53

274

53

276

252

295

233

280

54

284

50

CePa

23

25

27

21

23

25

27

21

23

25

28

20

pathDIP

52

290

291

51

133

60

152

41

71

233

226

68

SPIA

4

1

5

0

1

6

7

0

0

19

19

0

  1. NP stands for Number of Enriched Pathways, U is short for Union, and I is short for Intersection