Table 1 Summary of the downloaded datasets
From: Using BioPAX-Parser (BiP) to enrich lists of genes or proteins with pathway data
Dataset Name | Data Source | Cancer Type | \(\#\)Cases | \(\#\)MGenes |
|---|---|---|---|---|
COAD | TCGA | Colorectal Cancer (CC) | 750 | 5913 |
THCA | TCGA | Thyroid Cancer (TC) | 681 | 6270 |
UCEC | TCGA | Endometrial Cancer (EC) | 560 | 6574 |
GSE41011 | GEO | Colorectal Cancer (CC) | 19 | 791 |
GSE65144 | GEO | Thyroid Cancer (TC) | 12 | 6202 |
GSE63678 | GEO | Endometrial Cancer (EC) | 7 | 1024 |