Table 1 File suffix of VISPR-online input
From: VISPR-online: a web-based interactive tool to visualize CRISPR screening experiments
Analysis tools | Output file | Suffix of output file | VISPR-online input |
|---|---|---|---|
MAGeCK | Gene summary | *.gene_summary.txt | Gene summary |
Normalized count | *.count_normalized.txt | Normalized count | |
sgRNA summary | *.sgrna_summary.txt | sgRNA summary | |
BAGEL | Foldchange | *.foldchange.txt | Foldchange |
JACKS | Gene score | *_gene_JACKS_results.txt | Gene score |
Foldchange | *_logfoldchange_means.txt | foldchange |