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Fig. 7 | BMC Bioinformatics

Fig. 7

From: Predicting synchronized gene coexpression patterns from fibration symmetries in gene regulatory networks in bacteria

Fig. 7

Similarity in gene expression data for selected pairs of genes belonging to the same fiber. Gene co-expression is demonstrated on the data from all experiments in the Ecomics database. We pick best examples out of 85 fibers obtained in E. coli. a, b Gene expression of pairs of genes in rrsH, rrsG and ykgM, znuA for 1575 experimental conditions from Ecomics. It’s easy to see that data is highly correlated. c Gene expression of rrsH (Position in genome: 223771–> 225312) vs gene expression of rrsG (Position in genome: 2729616 <– 2731157), correlation = 0.98, d Gene expression of ykgM (312514 <– 312777) vs gene expression of znuA (1941651 <– 1942583), correlation = 0.58, e Gene expression of yfdE (2488023 <– 2489168) vs gene expression of yegR (2167989<– 2168306), correlation = 0.49, f Gene expression of fadI (240859 <– 243303) vs gene expression of fadE (2459159 <– 2460469), correlation = 0.49

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BMC Bioinformatics

ISSN: 1471-2105

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