Table 1 Evaluation summary of assemblies using MaSuRCA contigs as input assemblies for HG001

Number of scaffolds (> 1000 bp)

119,630

166,476

307,205

213,076

300,831

Largest scaffold (bp)

62,433,675

4,043,217

202,889

2,756,390

177,746

Total assembled length (bp)

3,345,341,888

3,672,256,418

3,038,310,109

2,908,519,565

2,907,642,015

NG50 (bp)

17,657,864

400,954

14,042

37,406

13,405

NGA50 (bp)

380,495

17,539

13,705

15,020

13,232

Relocation

11,015

92,267

3828

51,228

1648

Inversion

2939

5349

1637

5190

180

Translocation

2472

2294

903

10,828

849

Number of misassemblies

16,426

99,910

6368

67,246

4475