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Table 1 Selection criteria for Groups 1 and 2 and number of examples

From: Investigation of sequence features of hinge-bending regions in proteins with domain movements using kernel logistic regression

Criterion

Group 1

Group 2

No of domains

2

2

Min no of residues in domain

80

80

Min angle of rotation

20°

15°

Max intradomain backbone RMSD

2.5 Å

3.0 Å

Max no of bending regions

3

5

Max no of residues in a bending region

10

15

Number of domain movements before CD-Hit filtering (90%)

910

1389

Number of domain movements after CD-Hit filtering (90%)a

241

372

Number of domain movements after CD Hit filtering (40%)

171

268

Number of domain movements after CD-Hit filtering (20%)

136

222

  1. aSee Additional Data_1 for list of pairs of structures by protein name and PDB codes