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Table 9 Runtimes and peak memory consumption for database construction (build) and querying for AFS10

From: A big data approach to metagenomics for all-food-sequencing

Data set

 

AFS-MetaCache

AFS-previous

AFS10

Build time

47m

7h 0m

 

Build memory

35 GB

5GB

 

Query speed

17.1 MR/m

0.04 MR/m

 

Query memory

30 GB

6GB

  1. Query speeds are measured for the KAL_D dataset in terms of million reads per minute (MR/m)