From: A big data approach to metagenomics for all-food-sequencing
Tool | Build time | Max. Memory | Query Speed | Max. Memory |
---|---|---|---|---|
AFS-MetaCache (1 part.) | 3h 10min | 135 GB | 7.2 MR/m | 117 GB |
AFS-MetaCache (2 part.) | 3h 04min | 82 GB | 3.1 MR/m | 70 GB |
AFS-MetaCache (4 part.) | 3h 45min | 52 GB | 2.5 MR/m | 39 GB |
MetaCacheSpark (8Ex-32Th) | 2h 57min | 175 GB | 4.3 MR/m | 76 GB |
MetaCacheSpark (16Ex-16Th) | 1h 57min | 100 GB | 3.4 MR/m | 48 GB |
MetaCacheSpark (32Ex-8Th) | 1h 25min | 69 GB | 2.2 MR/m | 37 GB |
MetaCacheSpark (64Ex-4Th) | 1h 03min | 45 GB | 1.4 MR/m | 29 GB |