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Table 1 Food-related reference genomes used for database construction

From: A big data approach to metagenomics for all-food-sequencing

Item

Name

ID

Size on disk

1

Sus scrofa (pig)

GCF_000003025.6

2.4GB

2

Equus caballus (horse)

GCF_002863925.1

2.4GB

3

Meleagris gallopavo (turkey)

GCF_000146605.2

1.2GB

4

Mus musculus (house mouse)

GCF_000001635.26

2.7GB

5

Gallus gallus (chicken)

GCF_000002315.5

1.1GB

6

Ovis aries (sheep)

GCF_000298735.2

2.5GB

7

Rattus norvegicus (Norway rat)

GCF_000001895.5

2.8GB

8

Bos taurus (cattle)

GCF_002263795.1

2.6GB

9

Bubalus bubalis (water buffalo)

GCF_003121395.1

2.6GB

10

Cervus elaphus hippelaphus (red deer)

GCA_002197005.1

3.3GB

11

Capreolus capreolus (Western roe deer)

GCA_000751575.1

3.0GB

12

Struthio camelus australis (African ostrich)

GCA_000698965.1

1.2GB

13

Anas platyrhynchos (mallard)

GCF_003850225.1

1.1GB

14

Capra hircus (goat)

GCF_001704415.1

2.8GB

15

Oryctolagus cuniculus (rabbit)

GCF_000003625.3

2.6GB

16

Cavia aperea (Brazilian guinea pig)

GCA_000688575.1

2.6GB

17

Camelus ferus (Wild Bactrian camel)

GCF_000311805.1

1.9GB

18

Canis lupus familiaris (dog)

GCF_000002285.3

2.3GB

19

Felis catus (domestic cat)

GCF_000181335.3

2.4GB

20

Homo sapiens (human)

GCF_000001405.38

3.1GB

21

Equus asinus (ass)

GCA_001305755.1

2.3GB

22

Rangifer tarandus (reindeer)

GCA_004026565.1

2.9GB

23

Phasianus colchicus (Ring-necked pheasant)

GCA_004143745.1

987MB

24

Glycine max (soybean)

GCF_000004515.5

946MB

25

Zea mays (maize)

GCF_000005005.2

2.1GB

26

Triticum aestivum (bread wheat)

GCA_900519105.1

14.0GB

27

Secale cereale (rye)

GCA_900079665.1

1.8GB

28

Hordeum vulgare (barley)

GCA_004114815.1

3.8GB

29

Oryza sativa Japonica Group (Japanese rice)

GCF_001433935.1

362MB

30

Arachis hypogaea (peanut)

GCF_003086295.1

2.4GB

31

Saccharomyces cerevisiae S288C (baker’s yeast)

GCA_000146045.2

12MB

Total

  

74GB