Fig. 1
From: MethHaplo: combining allele-specific DNA methylation and SNPs for haplotype region identification
Illustration of haplotype region identification. a ASM and its effect on gene expression. Solid black circles represent methylated sites, and open circles represent unmethylated sites. In this example, the gene in the paternal haplotype without DNA methylation is expressed. b Schematic of haplotype region identification with ASM. c Schematic of haplotype region identification with SNPs, ASM and Hi-C data. The left flow chart represents the haplotype region identification with SNPs only, and the right flow chart represents haplotype region identification with ASM, SNPs, and Hi-C data. d A specific example of haplotype region identification with ASM, SNPs and Hi-C