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Table 1 Edge correctness score and sequence similarity score (mean values) for several protein-protein interaction network alignment methods and tools, for 300 pairs of virus-host protein-protein interaction networks from the STRING Viruses database, for λ=0.5. Sequence similarity scores are normalized global alignment scores

From: Alignment of biological networks by integer linear programming: virus-host protein-protein interaction networks

Alignment method or tool

Edge Correctness

Sequence Similarity

L-GRAAL

0.8297

0.8979

Integer Linear Programming

0.7845

0.9044

AligNet

0.5471

0.8823

PINALOG

0.3920

0.9210

HubAlign

0.6461

0.5777

SPINAL

0.5054

0.6900