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Table 2 The performance comparison of F1 score between our model and four existing sequence-based methods on four PPI datasets

From: Graph-based prediction of Protein-protein interactions with attributed signed graph embedding

Method

Human

E.coli

C. elegan

Drosophila

Our model

98.78

98.92

99.25

99.80

Lasagna [35]

97.25

89.92

98.40

98.89

DFC [25]

95.14

——

——

96.39

DLSTM [25]

89.10

——

——

91.05

SAE [20]

94.53

96.03

97.17

97.16