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Table 1 Top-10 epistatic interactions associated with AMD captured by Epi-GTBN compare with other methods

From: Epi-GTBN: an approach of epistasis mining based on genetic Tabu algorithm and Bayesian network

ID

SNP 1

SNP 2

MI

References

AntEpiSeeker

MDR

BOOST

SNPRuler

1

rs380390

rs1363688

0.205025859

Sun et al. 2017, Shang et al. 2014, Tuo et al. 2016, Shang et al. 2015

–

✓ (11)

–

–

2

rs380390

rs2402053

0.204420493

Sun et al. 2017, Tuo et al. 2016, Shang et al. 2015

Han et al. 2012

–

–

–

–

3

rs380390

rs10512174

0.192477486

Sun et al. 2017, Shang et al. 2015

–

–

–

–

4

rs380390

rs718263

0.192360092

Sun et al. 2017, Shang et al. 2015

–

–

–

–

5

rs1329428

rs9328536

0.190001652

Sun et al. 2017, Kwon et al. 2014, Tuo et al. 2016

✓ (top-10)

–

–

–

6

rs1329428

rs7467596

0.190001652

Tuo et al. 2016

–

–

–

–

7

rs10503216

rs9316435

0.188192429

–

✓ (top-10)

✓

✓

–

8

rs380390

rs335368

0.184951682

–

–

–

–

–

9

rs380390

rs555174

0.184735375

–

–

✓ (top-10)

–

–

10

rs380390

rs724972

0.183950563

Tuo et al. 2016

–

✓ (top-10)

–

–