From: Analysis of networks of host proteins in the early time points following HIV transduction
GO code | GO term | Significantly changed parameter | Direction of change in H04 |
---|---|---|---|
GO.0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Df | decrease |
GO.0000228 | nuclear chromosome | Df | decrease |
GO.0000375 | RNA splicing, via transesterification reactions | Df | decrease |
GO.0000398 | mRNA splicing, via spliceosome | Df | decrease |
GO.0000956 | nuclear-transcribed mRNA catabolic process | Df | decrease |
GO.0003735 | structural constituent of ribosome | Df | decrease |
GO.0005198 | structural molecule activity | Df | decrease |
GO.0005515 | protein binding | Df | decrease |
GO.0005524 | ATP binding | Df, Dc | decrease |
GO.0005622 | intracellular | Df | decrease |
GO.0005737 | cytoplasm | Df | decrease |
GO.0005739 | mitochondrion | Df | decrease |
GO.0005840 | ribosome | Df | decrease |
GO.0006351 | transcription, DNA-templated | Df, Dc | decrease |
GO.0006366 | transcription from RNA polymerase II promoter | Df, Dc | decrease |
GO.0006367 | transcription initiation from RNA polymerase II promoter | Df | decrease |
GO.0006396 | termination of RNA polymerase II transcription | Df | decrease |
GO.0006397 | mRNA processing | Df | decrease |
GO.0006401 | RNA catabolic process | Df | decrease |
GO.0006402 | mRNA catabolic process | Df | decrease |
GO.0006412 | translation | Df | decrease |
GO.0006413 | translational initiation | Df, Dc | decrease |
GO.0006414 | translational elongation | Df, Dc | decrease |
GO.0006415 | translational termination | Df | decrease |
GO.0006417 | regulation of translation | Df, Dc | decrease |
GO.0006518 | peptide metabolic process | Df | decrease |
GO.0006605 | protein targeting | Df | decrease |
GO.0006614 | SRP-dependent cotranslational protein targeting to membrane | Df | decrease |
GO.0006732 | coenzyme metabolic process | Df, Dc | decrease |
GO.0006886 | intracellular protein transport | Df | decrease |
GO.0008104 | protein localization | Rf | decrease |
GO.0008152 | metabolic process | Df | decrease |
GO.0008380 | RNA splicing | Df | decrease |
GO.0009056 | catabolic process | Df | decrease |
GO.0009892 | negative regulation of metabolic process | Df | decrease |
GO.0009987 | cellular process | Df | decrease |
GO.0010468 | regulation of gene expression | Df | decrease |
GO.0010556 | regulation of macromolecule biosynthetic process | Df | decrease |
GO.0010608 | posttranscriptional regulation of gene expression | Df, Dc | decrease |
GO.0010941 | regulation of cell death | Df | decrease |
GO.0015031 | protein transport | Df | decrease |
GO.0016032 | viral process | Df | increase |
GO.0016043 | cellular component organization | Df | decrease |
GO.0016070 | RNA metabolic process | Df, Dc | decrease |
GO.0016071 | mRNA metabolic process | Df | decrease |
GO.0016482 | cytoplasmic transport | Df | decrease |
GO.0016604 | nuclear body | Df, Dc | decrease |
GO.0017076 | purine nucleotide binding | Df, Dc | decrease |
GO.0018130 | heterocycle biosynthetic process | Df, Dc | decrease |
GO.0019058 | viral life cycle | Df | decrease |
GO.0019080 | viral gene expression | Df | decrease |
GO.0019083 | viral transcription | Df | decrease |
GO.0019222 | regulation of metabolic process | Df | decrease |
GO.0019438 | aromatic compound biosynthetic process | Df, Dc | decrease |
GO.0019538 | aromatic compound biosynthetic process | Df | decrease |
GO.0019899 | enzyme binding | Df | decrease |
GO.0019900 | kinase binding | Df, Dc | increase |
GO.0019901 | protein kinase binding | Df | increase |
GO.0022607 | cellular component assembly | Df | decrease |
GO.0022626 | cytosolic ribosome | Df | decrease |
GO.0030554 | adenyl nucleotide binding | Df, Dc | decrease |
GO.0031625 | ubiquitin protein ligase binding | Df, Dc | decrease |
GO.0031974 | membrane-enclosed lumen | Df | decrease |
GO.0032550 | purine ribonucleoside binding | Df, Dc | decrease |
GO.0032553 | ribonucleotide binding | Df, Dc | decrease |
GO.0032555 | purine ribonucleotide binding | Df, Dc | decrease |
GO.0032774 | RNA biosynthetic process | Df, Dc | decrease |
GO.0034248 | regulation of cellular amide metabolic process | Df | decrease |
GO.0034613 | cellular protein localization | Rf | decrease |
GO.0034622 | cellular macromolecular complex assembly | Df | decrease |
GO.0034645 | cellular macromolecule biosynthetic process | Df | decrease |
GO.0034654 | nucleobase-containing compound biosynthetic process | Df, Dc | decrease |
GO.0034655 | nucleobase-containing compound catabolic process | Df | decrease |
GO.0035639 | purine ribonucleoside triphosphate binding | Df, Dc | decrease |
GO.0036094 | small molecule binding | Df, Dc | decrease |
GO.0042981 | regulation of apoptotic process | Df | decrease |
GO.0043065 | positive regulation of apoptotic process | Df | decrease |
GO.0043066 | negative regulation of apoptotic process | Df, Dc | decrease |
GO.0043226 | organelle | Df | decrease |
GO.0043227 | membrane-bounded organelle | Df, Dc | decrease |
GO.0043229 | intracellular organelle | Df | decrease |
GO.0043231 | intracellular membrane-bounded organelle | Df | decrease |
GO.0043233 | organelle lumen | Df | decrease |
GO.0044085 | cellular component biogenesis | Df | decrease |
GO.0044237 | cellular metabolic process | Df | decrease |
GO.0044238 | primary metabolic process | Df | decrease |
GO.0044248 | cellular catabolic process | Df | decrease |
GO.0044249 | cellular biosynthetic process | Df | decrease |
GO.0044260 | cellular macromolecule metabolic process | Df | decrease |
GO.0044265 | cellular macromolecule catabolic process | Df | decrease |
GO.0044267 | cellular protein metabolic process | Df | decrease |
GO.0044271 | cellular nitrogen compound biosynthetic process | Df, Dc | decrease |
GO.0044391 | ribosomal subunit | Df | decrease |
GO.0044422 | organelle part | Df | decrease |
GO.0044424 | intracellular part | Df | decrease |
GO.0044444 | cytoplasmic part | Df | decrease |
GO.0044446 | intracellular organelle part | Df | decrease |
GO.0044451 | nucleoplasm part | Df, Dc | decrease |
GO.0044454 | nuclear chromosome part | Df | decrease |
GO.0044802 | single-organism membrane organization | Df, Dc | decrease |
GO.0045184 | establishment of protein localization | Df | decrease |
GO.0046907 | intracellular transport | Df, Dc | decrease |
GO.0051084 | de novo posttranslational protein folding | Df | increase |
GO.0051704 | multi-organism process | Df, Dc | increase |
GO.0060255 | regulation of macromolecule metabolic process | Df | decrease |
GO.0060548 | negative regulation of cell death | Df, Dc | decrease |
GO.0065003 | macromolecular complex assembly | Df | decrease |
GO.0070013 | intracellular organelle lumen | Df | decrease |
GO.0070972 | protein localization to endoplasmic reticulum | Rf | decrease |
GO.0071013 | catalytic step 2 spliceosome | Df | decrease |
GO.0071702 | organic substance transport | Df, Dc | decrease |
GO.0071704 | organic substance metabolic process | Df | decrease |
GO.0071705 | nitrogen compound transport | Df, Dc | decrease |
GO.0071822 | protein complex subunit organization | Df | increase |
GO.0071840 | cellular component organization or biogenesis | Df | decrease |
GO.0072594 | establishment of protein localization to organelle | Df | decrease |
GO.0080090 | regulation of primary metabolic process | Df | decrease |
GO.0080135 | regulation of cellular response to stress | Df, Dc | decrease |
GO.0090304 | nucleic acid metabolic process | Df, Dc | decrease |
GO.0097367 | carbohydrate derivative binding | Df, Dc | decrease |
GO.1901362 | organic cyclic compound biosynthetic process | Df, Dc | decrease |
GO.1901566 | organonitrogen compound biosynthetic process | Df | decrease |
GO.1901575 | organic substance catabolic process | Df | decrease |
GO.1901576 | organic substance biosynthetic process | Df | decrease |
GO.1902580 | single-organism cellular localization | Df | decrease |