Fig. 2
From: DNAscan: personal computer compatible NGS analysis, annotation and visualisation
Variant calling assessment. Graph a shows the precision, sensitivity and F-measure of DNAscan in Fast, Normal and Intensive mode, SpeedSeq and GATK best practice workflow in calling SNVs and small indels over the whole exome sequencing of NA12878. Illumina platinum calls were used as true positives. The first three columns show the results for SNVs and the last three columns for indels. Graph b shows the time needed and the memory footprint for the same pipelines