Table 2 Alignment rates between genome versions and aligners
From: Similarities and differences between variants called with human reference genome HG19 or HG38
| Â | HG19 | HG38 |
|---|---|---|
Aligners | Alignment Rate (%) | Alignment Rate (%) |
Bowtie2 | 98.559 | 98.503 |
BWA | 99.629 | 99.633 |
ISAAC | 99.146 | 99.034 |