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Table 6 Scores from word and phrase significance analysis of each tool to recover biologically relevant terms and phrases

From: Comparative analysis of differential gene expression analysis tools for single-cell RNA sequencing data

Methods

Score (phrase)

Score (word)

Overall score (word+phrase)

Monocle2

3

3

6

MAST

3

3

6

DESeq2

2

3

5

D3E

2

3

5

DEsingle

2

3

5

SigEMD

3

2

5

EMDomics

2

2

4

edgeR

2

2

4

SINCERA

2

2

4

SCDE

1

1

2

scDD

1

1

2

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BMC Bioinformatics

ISSN: 1471-2105

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