Number of Simulations | 1000 runs times 30 replicates for each sample size scenario |
Upper Threshold for MAF | 0.01 and 0.05 |
Variant Weighting | Madsen and Browning [12] |
Disease Prevalence | 5% |
Number of Disease Loci | 10 |
Odds Ratio (OR) | All disease loci with OR 2.5; Half of disease loci with risk effect, the other half with protective effect |