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Table 1 Genotype error (eZ) and proportion error (eW) computed for SeqClone, Clomial, BayClone and Cloe for T=20, C=3, S=5 and r∈{50,200,1000}

From: SeqClone: sequential Monte Carlo based inference of tumor subclones

 

SeqClone

Clomial

BayClone

Cloe

r

e Z

e W

e Z

e W

e Z

e W

e Z

e W

50

0.035 (0.005)

0.053 (0.005)

0.040 (0.005)

0.071 (0.005)

0.080 (0.007)

0.059 (0.006)

0.065 (0.005)

0.064 (0.008)

200

0.012 (0.002)

0.022 (0.002)

0.025 (0.004)

0.046 (0.007)

0.075 (0.009)

0.062 (0.008)

0.060 (0.006)

0.052 (0.003)

1000

0.002 (0.001)

0.019 (0.002)

0.020 (0.002)

0.039 (0.004)

0.060 (0.004)

0.038 (0.005)

0.065 (0.004)

0.037 (0.004)

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BMC Bioinformatics

ISSN: 1471-2105

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