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Table 13 Prediction results on seven independent PPIs datasets, PPIs of H. sapiens are used as the training set

From: Predicting protein-protein interactions using high-quality non-interacting pairs

Species

Test pairs

Negative

  

NIP-SS

NIP-RW

Sub

C. elegans

4013 (interactions)

86.10%

78.11%

94.42%

E. coli

6984 (interactions)

85.34%

79.65%

92.68%

H. sapiens

1412 (interactions)

86.20%

85.03%

96.29%

H. pylori

1420 (interactions)

81.86%

79.15%

92.28%

M. musculus

313 (interactions)

85.64%

80.66%

96.10%

Mammalian

1937 (non-interactions)

15.69%

18.58%

4.67%

Mammalian-imbalanced

2250 (313 interactions, 1937 non-interactions)

23.45%

27.56%

17.75%