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Table 11 Results of DNNs with AC, CT, LD and MCD feature descriptors on S. cerevisiae

From: Predicting protein-protein interactions using high-quality non-interacting pairs

Model

Dimension

ACC

PE

RE

SPE

MCC

F 1

AUC

DNNs-AC

(210+210)

94.25% ± 0.22%

94.70% ± 0.49%

93.75% ± 0.26%

94.74% ± 0.56%

88.50% ± 0.45%

94.22% ± 0.19%

98.15% ± 0.08%

DNNs-CT

(343+343)

94.37% ± 0.24%

95.55% ± 0.75%

93.09% ± 0.81%

95.67% ± 0.65%

88.78% ± 0.48%

94.30% ± 0.23%

98.20% ± 0.21%

DNNs-LD

(630+630)

94.41% ± 0.14%

95.46% ± 0.41%

93.25% ± 0.44%

95.56% ± 0.44%

88.84% ± 0.28%

94.34% ± 0.15%

98.23% ± 0.06%

DNNs-MCD

(882+882)

94.25% ± 0.22%

94.70% ± 0.49%

93.75% ± 0.26%

94.74% ± 0.56%

88.50% ± 0.45%

94.22% ± 0.19%

98.15% ± 0.08%

  1. ∙/∘ indicates whether DNNs-AC is statistically (according to pairwise t-test at 95% significance level) superior/inferior to the other descriptors