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Table 1 The details of Ak(k=1, 2, 3, 4 and 5)

From: Analyzing the similarity of samples and genes by MG-PCC algorithm, t-SNE-SS and t-SNE-SG maps

A k

NO. of

NO. of

Tumor

Control

P-value

 

genes

samples

samples(Bk)

samples(Ck)

P-value

A 1

1355

31

16 TN-smokers

15 NN-smokers

< 10−5

   

(GDS3257)

(GDS3257)

 

A 2

1129

36

18 TF-smokers

18 NF-smokers

< 10−5

   

(GDS3257)

(GDS3257)

 

A 3

2055

40

24 TC-smokers

16 NC-smokers

< 10−5

   

(GDS3257)

(GDS3257)

 

A 4

817

76

18 TF-smokers,

18NF-smokers

< 10−5

   

24 TC-smokers

16NC-smokers

< 10−5

   

(GDS3257)

(GDS3257)

A 5

1739

120

60 TN-smokers

60 NN-smokers

< 10−12

   

(GDS3837)

(GDS3837)

 
  1. TN-smokers: tumor never-smokers; TF-smokers: tumor former-smokers; TC-smokers: tumor current-smokers; NN-smokers: normal never-smokers; NF-smokers: normal former-smokers; NC-smokers: normal current-smokers. was that P-value of the mixing samples was less than < 10−5 also