From: A multi-omics approach for identifying important pathways and genes in human cancer
Consensus cancer genes | All TCGA genes | ||||
---|---|---|---|---|---|
# | Gene set | \(R^{2}_{pred}\) | # | Gene set | \(R^{2}_{pred}\) |
1 | BIOCARTA_RANMS_PATHWAY | 0.487 | 1 | BIOCARTA_RANMS_PATHWAY | 0.465 |
2 | REACTOME_ACTIVATION_OF_ATR_IN_RESPO... | 0.486 | 3 | REACTOME_G2_M_CHECKPOINTS | 0.459 |
3 | REACTOME_G2_M_CHECKPOINTS | 0.483 | 2 | REACTOME_ACTIVATION_OF_ATR_IN_RESPO... | 0.456 |
4 | REACTOME_CELL_CYCLE | 0.472 | 6 | REACTOME_CDC6_ASSOCIATION_WITH_THE_... | 0.450 |
5 | REACTOME_MITOTIC_M_M_G1_PHASES | 0.468 | 14 | REACTOME_CHROMOSOME_MAINTENANCE | 0.434 |
6 | REACTOME_CDC6_ASSOCIATION_WITH_THE_... | 0.468 | 9 | REACTOME_G0_AND_EARLY_G1 | 0.433 |
7 | REACTOME_DNA_REPLICATION | 0.464 | 4 | REACTOME_CELL_CYCLE | 0.431 |
8 | REACTOME_CELL_CYCLE_MITOTIC | 0.464 | 8 | REACTOME_CELL_CYCLE_MITOTIC | 0.429 |
9 | REACTOME_G0_AND_EARLY_G1 | 0.454 | 5 | REACTOME_MITOTIC_M_M_G1_PHASES | 0.428 |
10 | PID_ATR_PATHWAY | 0.450 | 7 | REACTOME_DNA_REPLICATION | 0.427 |