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Table 2 Performance of gene feature selection methods with KNN classifier (high) and SVM classifier (low) in two-class datasets

From: Feature selection of gene expression data for Cancer classification using double RBF-kernels

Dataset: Gastric cancer

 

DKBCGS

GINI

Χ2-Statistic

Info.Gain

KW

RF

MRMR

KBCGS

ACC

0.9821

0.9664

0.9875

0.9779

0.9038

0.9548

0.9986

0.9716

TNR

1.0000

0.9500

0.9367

1.0000

0.9500

0.9800

1.0000

0.9755

TPR

0.9818

0.9677

0.9969

0.9759

0.8771

0.9498

1.0000

0.9826

TIME(s)

0.0846

0.7349

1.4736

0.7542

9.7452

4.2604

0.9007

0.6518

Dataset: DLBCL

 

DKBCGS

GINI

Χ2-Statistic

Info.Gain

KW

RF

MRMR

KBCGS

ACC

0.9833

0.9615

0.9865

0.9712

0.9123

0.9245

0.9341

0.9795

TNR

0.9943

0.9456

0.9422

0.9854

0.9457

0.9456

0.9654

1.0000

TPR

0.9863

0.9513

0.9645

0.9541

0.9024

0.9234

0.9432

0.9712

TIME(s)

0.1215

0.2257

0.1954

0.1857

0.1678

0.5111

0.0931

0.2148

Dataset: Gastric cancer

 

DKBCGS

GINI

Χ2-Statistic

Info.Gain

KW

RF

MRMR

KBCGS

ACC

1.0000

0.9768

0.9855

0.9623

0.9168

0.973

0.9988

0.9822

TNR

1.0000

0.9611

0.95

0.9158

0.9316

0.9433

1.0000

1.0000

TPR

1.0000

0.9929

0.9971

0.9776

0.9121

0.9827

1.0000

0.9755

TIME(s)

0.0846

0.7349

1.4736

0.7542

9.7452

4.2604

0.9007

0.7418

Dataset: DLBCL

 

DKBCGS

GINI

Χ2-Statistic

Info.Gain

KW

RF

MRMR

KBCGS

ACC

1.0000

1

0.9975

1.0000

0.9975

0.9750

0.9975

0.9845

TNR

1.0000

1.0000

1.0000

1.0000

0.9683

0.9733

0.9571

0.9579

TPR

1.0000

1.0000

1.0000

1.0000

0.8383

0.9437

0.9917

0.9931

TIME(s)

0.1215

0.2257

0.1954

0.1857

1.6478

0.5111

0.0931

0.2148