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Fig. 6 | BMC Bioinformatics

Fig. 6

From: wTO: an R package for computing weighted topological overlap and a consensus network with integrated visualization tool

Fig. 6

GO terms enriched within each cluster. Enriched GO terms of the category “biological process” are clustered by REVIGO [76] with the SimRel measurement and allowed similarity of 0.5. The size of the circle represents the frequency of the GO term in the database, i.e. GO groups with many members are represented by larger circles. The color code refers to the log10(p-value) of the GO enrichment analysis: the closer to 0, the more red, the lower this value, the greener the bubble is. After removing redundancies, the remaining terms are visualized in semantic similarity-based scatter-plots, where the axes correspond to semantic distance. Brain related functions were detected, for instance in Clusters 1 and 3, that are involved with cognition

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