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Table 3 Homozygosity Rates between methods

From: Benchmarking the HLA typing performance of Polysolver and Optitype in 50 Danish parental trios

Typer

Overall

HLA-A

HLA-B

HLA-C

Optitype (4-digit)

0.09

0.08

0.08

0.11

Polysolver (8-digit)

0.08

0.08

0.02

0.14

Polysolver (4-digit)

0.12

0.12

0.09

0.15

  1. Homozygosity Rates between methods, based on the number of identical alleles in each locus, either HLA-A, HLA-B or HLA-C; or across all three (Overall)
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BMC Bioinformatics

ISSN: 1471-2105

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