Table 9 The feature importance in the first-stage models starting with RaptorX-Contact predictions
From: Identification of residue pairing in interacting β-strands from a predicted residue contact map
Window size | 1st stage | -Ridge | -RaptorX | -Ridge -RaptorX | -DeepCNF | -Map Features | -Position Features |
|---|---|---|---|---|---|---|---|
3 × 3 | 71.51% | 71.02% | 66.48% | 13.04% | 70.14% | 71.34% | 71.30% |
5 × 5 | 71.70% | 71.58% | 66.77% | 15.75% | 70.50% | 71.37% | 71.37% |
7 × 7 | 71.50% | 71.47% | 66.93% | 17.95% | 70.59% | 71.31% | 71.21% |
9 × 9 | 71.43% | 71.44% | 66.70% | 19.80% | 70.39% | 71.03% | 71.08% |