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Table 6 Performance comparison of DSSP-based RDb2C, bbcontacts and other methods at the residue level

From: Identification of residue pairing in interacting β-strands from a predicted residue contact map

Methods

BetaSheet916

BetaSheet1452

Precision

Recall

F-measure

Precision

Recall

F-measure

RDb2C

76.28%

65.94%

70.74%

76.56%

67.86%

71.95%

bbcontacts

72.39%

65.10%

68.55%

73.17%

65.39%

69.06%

BCov6*

42.40%

43.90%

43.10%

42%

45%

43%

BCov*

40.90%

42.40%

41.60%

 

MLN-2S*

47.30%

42.70%

44.90%

 

MLN*

46.10%

39.30%

42.40%

 

BetaPro*

38.00%

44.10%

40.80%

 
  1. Data for BCov6/BCov and MLN-2S/MLN/BetaPro are taken from [31, 33], respectively. Winner in each category is highlighted in bold