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Table 2 ASTRAL-III-beta vs ASTRAL-III. Columns are defined similar to Table 1.

From: ASTRAL-III: polynomial time species tree reconstruction from partially resolved gene trees

Model Contraction FN |X| |Y| Quartet Running
condition      score time
avian-0.5X-500bp None −0.003 −3% −9% −0.02% −48%
avian-1X-250bp None −0.001 −3% −9% 0.00% −56%
avian-1X-500bp None −0.001 −2% −6% 0.00% −50%
avian-1X-1000bp None −0.001 −1% −4% 0.00% −58%
avian-1X-1500bp None 0.001 −1% −4% 0.00% −57%
avian-2X-500bp None −0.002 −2% −4% 0.00% −65%
avian-0.5X-500bp 10% −0.003 −3% −29% −0.01% −69%
avian-1X-250bp 10% −0.001 −50% −40% 0.00% −81%
avian-1X-500bp 10% 0.003 −18% −62% −0.01% −62%
avian-1X-1000bp 10% 0.000 −5% −8% 0.00% −61%
avian-1X-1500bp 10% 0.003 0% −1% 0.00% −55%
avian-2X-500bp 10% −0.002 −14% −18% 0.00% −62%
  1. Negative numbers indicate ASTRAL-III-beta has a larger value (i.e., has higher error, larger search space, better quartet scores, and is slower)